Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------DSLPERIDLFV----SLFDYNSATTSYDIRSIQTDFPTRLLTPDSMLPQTSEYPLKDIQLLYKLAQSCTGKLPLSPLITEPLVFTRSLCKGSSLSPRWFARSGLIHPGGGTYAFRYAEK------------------YPAQFANLLPYMHIQERPNAAEGTLLYHLQ---NMGEDAINALVSGASMFGSGSDLWLRKGDIYYLFNEET----------WLTNANKAGLSYSLLSADNTCFIQRGNICWDVEDHS-------------------------------------------- |
| 1JR7 Chain:A ((1-311)) | GQDYSGFTLTPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVAKILDDLCAN-QLQPL-LLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNF-DAMSGQYYARFVVKNVYLRQPHRVMELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYASNHYQTHQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28975 for 1406 contacts (-20.6/contact) +
2D Compatibility (PS) -21634 + (NN) 5579 + (LL) 416
1D Compatibility (HY) -8400 + (ID) 1500
Total energy: -54514.0 ( -38.77 by residue)
QMean score : -0.037
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