Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLY-YFNFVQIRVMPQIPAEL-KPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMGFTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG
2GH0 Chain:A ((8-207))
DSDLCLKFAMLCTLNDKCDRLRKAYGEA------CSGPHCQRHVCLRQLLTFFEKAAEPHAQGLLLCPCAPNDRGCGERRRNTIAPNCALPPVAPNCLELRRLCFSDPLCRSRLVDFQTHCHPMDILGTCATEQSRCLRAYLGLIGTAM---TPNFVSN-----VNTSVALSCTCRGSGNLQEECEMLEGFFSHNPCLTEAIAAKMRFHSQLFS
General information:
TITO was launched using:
RESULT:
Template:
2GH0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175720 for 1443 contacts (-121.8/contact) +
2D Compatibility (PS) -19650 + (NN) -4780 + (LL) 2028
1D Compatibility (HY) -1600 + (ID) 1400
Total energy: -201122.0 ( -139.38 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_2GH0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GH0-query.scw
PDB file :
Tito_Scwrl_2GH0.pdb
: