Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARLPAGIRFIISFSRDQWYRAFIFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLGYFYNIHSFGFYVVTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSP-SGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ
2GFP Chain:A ((26-171))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYIPAIADMA-RDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVT-T-S-SLTVLIAASAMQGMGTGVGGVMARTLP-RDLY-ERTQLRHANSLLN------MGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTL


General information:
TITO was launched using:
RESULT:

Template: 2GFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90993 for 998 contacts (-91.2/contact) +
2D Compatibility (PS) -14333 + (NN) 2873 + (LL) 22348
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -89055.0 ( -89.23 by residue)
QMean score : 0.160

(partial model without unconserved sides chains):
PDB file : Tito_2GFP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GFP-query.scw
PDB file : Tito_Scwrl_2GFP.pdb: