Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTAYLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCC-LTKLS----QDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASW-IGLGPVAPFVAAI-PLLA--LAGALALRNWGENYD----RQ--RAFSRTCAGG-LRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVL-DP-HG---APLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLL-SLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLAC-LGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 1PW4 Chain:A ((49-434)) | -----------------------------------------------------------ALAMPY-LVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW------WSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHA--ALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND---TAKQIFMQYVLPNKLLWYIAIANVFVYL-LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSD-KVFRGNRGATGVFFMTLVTIATIVYWMNPA---GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -355128 for 2828 contacts (-125.6/contact) +
2D Compatibility (PS) -36307 + (NN) -11073 + (LL) 6832
1D Compatibility (HY) -13600 + (ID) 1450
Total energy: -410726.0 ( -145.24 by residue)
QMean score : 0.286
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