Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MAPWPELGDAQPNPDKYLEGAAGQQPTAPDKSKETNKTDNTEAPVTKIELLPSYSTATLIDEPTEVDDPWNLPTLQDSGIKWSERDTKGKILCFFQGIGRLILLLGFLY-------------FFVCSLDILSSAFQ------LVGGKMAGQFFSNSSIMSNPLLGLV---------IGVLVTVLVQSSSTSTSIVVSMVSSSL--------LTVRAAIPIIMGANIGTSITNTIVALMQVGDRSEFRRAFAGAT--------------VHDFF-NWLSVLVLLPVEVATHYLEIITQLIVESFHFKNGEDAPDLLKVITKPFTKLIVQLDKKVISQI------AMNDEKAKNKSLVKIWCKTFTNKTQINVTVPSTANCTSPSLCWTDGIQNWTMKNVTYKENIAKCQHIFVNFHLPDLAVGTILLILSLLVLCGCLIMIVKILGSVLKGQVATVIKKTINTDFPFPFAWLT----GYLAILVGAGMT----------FIVQSSSVFTSALTPLIG----------IGVITIERAYPLTLGSNIGTTT---TAILAALASPGNALRSSLQIAL------CHFFFNISGILLWYPIPFTRLPIRMAKGLGNISAKYRWFAVF----YLIIFFFLIPLTVFGLSLAGWRVLVGVGVPVVFIIILVLCLRLLQSRCPRVLPKKLQNWNFLPLW----MRSLKPWDAVVSKFTGC-----FQMRCCCCCRVCCRACCLLCDCPKCCRCSKCCEDLEE---------AQEG-----------QDVPVKAPETFDNITISREAQGEVPASDSKTECTAL---------- |
| 2YIC Chain:A ((7-868)) | KNARVIELIAAYRNRGHLMADIDPLRLDNTRFRSTLWDLDREFQRKKLRDILSVLRDAYCRHVGVEYTHILEPEQQRWIQERVETKHDKPT-VAEQKYILSKLNAAEAFETFLQTKYVGQKRFSLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDD-PEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRG---SRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRELEKHLATAVDKAMLQRIGDAHLALPEGFTVHPRVRPVLEKRREMAYEGRIDWAFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG------QGPDHTSGRIERFLQLWAEGSMTIAMPSTPANYF--HLLRRHGKDGIQRPLIVFTPK----SMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKIYYELAARKAKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEILPDHFTGLKRISRRAMSAPSSGSSKVHAVEQQEILDTAFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -399869 for 5205 contacts (-76.8/contact) +
2D Compatibility (PS) -69041 + (NN) -5184 + (LL) 1788
1D Compatibility (HY) 6400 + (ID) 4350
Total energy: -470256.0 ( -90.35 by residue)
QMean score : 0.170
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