Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDII-----STMFNRKFMEELFKPQELYSKKALRTVY-ERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDTIKGFIRDS-PTILQQVDETLRQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVLPVSGPVPWGTEVPGLIRMFNNKGEEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLASWTQESIAPNPLAKEELNFLARLMGGMEIKKPSGPEPGFRLNLFTTDEEEEQAALTRPEELSYEVINIQATQDQQRSEELARIMGEFEITEQPRLSTSKGDDLLAMMDEL |
| 3VON Chain:C ((13-148)) | ----------------------QRLLAEPVPGIKAEPDE----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEE-YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLL--SIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29948 for 896 contacts (-33.4/contact) +
2D Compatibility (PS) -12534 + (NN) 9394 + (LL) 16388
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -23500.0 ( -26.23 by residue)
QMean score : 0.195
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