Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEELLSQVGGLGRFQMLHLVFILPSLMLLIPHILLENFAAAIPGHRCWVHMLDNNTGSGNETGILSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP----TFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVF----RDWQTLHVVASVPFFVFF-LLSRWLVESARWLIITNKLDEGLKALRKVARTNGIKNAEETLNIEVVRSTMQEELDAAQTKTT-VCDLFRNPSMRKRICILVFLRFANTIPFYGTMVNLQH-VGSNI---FLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLV---GLSILANTFVPKEMQTLR-VALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAA-LAPLLMT-LTVF-FTTLPWIIYGIFPIIGGLIV-FLLPETKNLPLPDTIKDVENQKKNLKEKA |
1PW4 Chain:A ((56-444)) | ------------------------------------------------------------------------------------------------------------------------------------VEQGF---SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCG---LPPIEEYK-------ND------------------------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGF-LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292697 for 2774 contacts (-105.5/contact) +
2D Compatibility (PS) -35796 + (NN) -5812 + (LL) 12840
1D Compatibility (HY) -14400 + (ID) 2550
Total energy: -338415.0 ( -122.00 by residue)
QMean score : 0.160
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