Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MFANLKYVSLGILVFQTT-----SLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRVLHDEILNKPMET-LKLAIP-----SGIYTLQNNLLYVALSNLDAATY------QVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQLDSKELSAGSQFVGLMAVLTACFS--SGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGL-----MGVYIYDGELVSKNGFFQGYNRLTWI--------------VVVLQALGGLVI--AAVIKYADNILKG-----FAT------SLSIILSTLISYFWLQDFV---------------------PTSVFFLGAILVITATFLYGYD--PKPAGNPTKA |
| 2VEO Chain:A ((11-440)) | AALPNPYDDPFYTTPSNIGTFAKGQVIQSRKVPTDIGNANNAASFQLQYRTTNTQNEAVADVATVWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLADSY---APELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQQTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIAGILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIFGLVPSLWFIKQAFDGTTPKVICGTPIPAIAGITTPSADQVLGSDLANQLRSLNGKQSAFGKPFGPITP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -299762 for 2791 contacts (-107.4/contact) +
2D Compatibility (PS) -33041 + (NN) 2635 + (LL) 452
1D Compatibility (HY) 2800 + (ID) 1750
Total energy: -328666.0 ( -117.76 by residue)
QMean score : 0.290
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