Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAPNISWSDLSALELLKS-IPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSA---PFEDIYFGLWGFNSSLACIAMGGMF---MALTWQTHLLALGCALFTAYLGVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL |
| 2G2R Chain:H ((60-194)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNQKFKGKATLTVDKSSNTAYMDLNSLTSEDSAVYYCVPYDYAADR-----VYWGH--------------GTLVTVSTAKTTAPSVYPLAPVCGGTTGSSVTLGCL-VKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRG----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2G2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58519 for 654 contacts (-89.5/contact) +
2D Compatibility (PS) -13201 + (NN) 2894 + (LL) 17448
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -60728.0 ( -92.86 by residue)
QMean score : -0.197
|
|
|