Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQEATLAIRPV-----GQGIGM---PDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG---------------------------------------------------- |
1U7P Chain:A ((1-164)) | MTRLPK--------LAV--FDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVP-----------VAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHH---KTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQAGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46584 for 675 contacts (-69.0/contact) +
2D Compatibility (PS) -10429 + (NN) 136 + (LL) 732
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -59045.0 ( -87.47 by residue)
QMean score : 0.209
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