Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MKKNSLYIISSLFFACVLFVYATATNFQNSTSARQVKTETYT-NTVTNVPIDIRYNSDKYFISGFASEVSVVLTGANRLSLASEMQESTRK--------FKVTADLTDAGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERIT--------GNYSGSVPLQAIDRNGVVL---PAVITPFDTI---MKVTTKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN-- |
| 1QF6 Chain:A ((242-532)) | RDHRKIGKQLDLYHMQEEAPGMVF-WHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWD---NYKDAMFTTSS--ENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGS------LHGLMRVRGFTQD-DAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHR-AILGSMERFIGILTEEFAGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28121 for 1832 contacts (15.3/contact) +
2D Compatibility (PS) -25908 + (NN) -2184 + (LL) 948
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -823.0 ( -0.45 by residue)
QMean score : 0.091
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