Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRILSLLGVIALFLGVILVSCGNDDDNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQA-GKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE |
3I8C Chain:A ((807-868)) | --------------------------------------------------------------------------AHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1431 for 323 contacts (4.4/contact) +
2D Compatibility (PS) -6571 + (NN) -1649 + (LL) 5184
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -4505.0 ( -13.95 by residue)
QMean score : 0.132
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