Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTQQLYFLNDIGKQKPESIRNRSAACPFC---DRENLTDILATEGSIIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMK---------YVNYLDNVEQDNFQGVIVQKNEHIELNISDRPIIGFTEFNIIIEDIGCIDELANYIQQTVRYILTDFHKGCSSYNLFFYYLNEKIICKVVPRFVVSPLYVGYKIPQVSTKIEDVKIQLAAYFTKQNDAIIHKKIE |
| 1Y23 Chain:A ((5-143)) | ------------------------ENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQV---TKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIPRYGKGDGFGAVWKTHADDYKPEDLQNISSSIAKRLA-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42329 for 769 contacts (-55.0/contact) +
2D Compatibility (PS) -13519 + (NN) -6078 + (LL) 10488
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -53638.0 ( -69.75 by residue)
QMean score : 0.204
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