Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGV----VNSAGAVDPRVAQWITTVCRATQWLDLRFVSGPGDLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARF-----DDFALPAAAGARADEQIRNGAPLAEVLEFLG--VPPSARPLVESVFDGRRTYVEIVAGE-----------HRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWFPDQPLTRDFD--EDAATHREPVLQRRTQKA |
| 1JYE Chain:A ((62-332)) | --------------------------LLIGVATSSLALHAPSQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH-EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLT-------TIKQDFRLLGQTSVDRLLQLS-QGQ-AVKGNQLLPVSLVKRKTT-LAP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78416 for 1992 contacts (-39.4/contact) +
2D Compatibility (PS) -26309 + (NN) -6552 + (LL) 2840
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -112087.0 ( -56.27 by residue)
QMean score : 0.319
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