Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------ESNYISVREEYPDIDSEVRAILLSHAQNGITISSIKSEYRKLTGNPFPLHDNVTDFLLTIPNVTAECSESGKRIFNLKAS---------------------------
3LFK Chain:A ((2-123))
SHMSAMAESKVLVKGTPFNKPVIKGKLENNYDMSQDEVSLLLFLKTHGGKIPLYRIKNETGLKDPESVLKNLMDYGFALEDKE----RLGEKIVLTSEGEFVAQAIRVRDEELRLKEMKQKKNVNR
General information:
TITO was launched using:
RESULT:
Template:
3LFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9710 for 474 contacts (-20.5/contact) +
2D Compatibility (PS) -7757 + (NN) 341 + (LL) 276
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -18600.0 ( -39.24 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_3LFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFK-query.scw
PDB file :
Tito_Scwrl_3LFK.pdb
: