Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMA----SPII----VNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPSLIKY--GYSINEK-----YIRSLSYALQLMRDRLPLS----ELYEGVGILETPFGYLISLDKVLK-------SIQFNQSSPSYPIVDSAYDLTP----------KGTFDNWFNMYIDEVKG-HLLLEL-----------AVIFGISALV---TSFLKHKHEIE---------FAGILFSFTGQSSTGKSTAAALAVSVAG--------NPTKGNETLFRSWNATRNALEGYLSNNYGIPI-----VFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQ---NDGLRVRTIEINEQFTTNATNAD--NIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDW---FEAKLKDE-----TNNTGIRMFKRYAVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKF------SDEGALKNMFENYGLISLKDDHIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRS-VKDNSGKKQSLVFYHLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF---------------------- |
| 1ITW Chain:A ((2-741)) | STPKIIYTLTDEAPALATYSLLPIIKAFTGSSGIAVETRDISLAGRLIATFPEYLTDTQKISDDLAELGKLATTPDANIIKLPNISASVPQLKAAIKELQQQGYKLPDYPEEPKTDTEKDVKARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWSADSKSHVAHMDNGDFYGSEKAALIGAPGSVKIELIAKDGSSTVLKAKTSVQAGEIIDSSVMSKNALRNFIAAEIEDAKKQGVLLSVHLKATMMKVSDPIMFGQIVSEFYKDALTKHAEVLKQIGFDVNNGIGDLYARIKTLPEAKQKEIEADIQAVYAQRPQLAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGKMWGPDGKLHDTKAVIPDRCYAGVYQVVIEDCKQHGAFDPTTMGSVPNVGLMAQKAEEYGSHDKTFQIPADGVVRVTDESGKLLLEQSVEAGDIWRMCQAKDAPIQDWVKLAVNRARATNTPAVFWLDPARAHDAQVIAKVERYLKDYDTSGLDIRILSPVEATRFSLARIREGKDT---ISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMSGGGLFETGAGGSAPKHVQQFLEEGYLRW--DSLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNNKSPARKVGEIDNRGSHFYLALYWAQALAAQTEDKELQAQFTGIAKALTDNETKIVGELAAAQGKPVDIAGYYHPNTDLTSKAMRPSATFNAALAPLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ITW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37681 for 4417 contacts (-8.5/contact) +
2D Compatibility (PS) -61164 + (NN) -10174 + (LL) 292
1D Compatibility (HY) 400 + (ID) 4400
Total energy: -112727.0 ( -25.52 by residue)
QMean score : 0.153
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