Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------KDAELQEREYHLKELREQLAKQTVAIAELTEELQSKCIQLNKLQ---
1LR1 Chain:A ((1-57))
SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL
General information:
TITO was launched using:
RESULT:
Template:
1LR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10130 for 198 contacts (51.2/contact) +
2D Compatibility (PS) -4787 + (NN) -2975 + (LL) 0
1D Compatibility (HY) 400 + (ID) 600
Total energy: 2168.0 ( 10.95 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1LR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LR1-query.scw
PDB file :
Tito_Scwrl_1LR1.pdb
: