Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKL-------TPPQISTLMRISDKLAGI-------------NAARFHDW--------QPDFTPANARQAILAFKGDVYTGLQAETF------SEDDFDFAQQHLRMLSGLYGVLRP--------------------------LDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKL----NAEIIKPVFLDEKN------GKFKIISFYAKKARGLMSRFI------IENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR------------------------------------- |
| 3R9M Chain:A ((1-376)) | GVDTHWFHRNPLKATAPVSFNYYGVVTGPSASKICNDLRSSRARLLELFTDLSCNPEMMKNAADSYFSLLQGFINSLDESTQESKLRYIQNFKWTDTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSS--LEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPIPFEFPPTSVQWTPETLAAFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12707 for 1778 contacts (-7.1/contact) +
2D Compatibility (PS) -26926 + (NN) -2404 + (LL) 112
1D Compatibility (HY) 0 + (ID) 1300
Total energy: -43225.0 ( -24.31 by residue)
QMean score : 0.175
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