Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLVKIMGSFLALSLIMIFSSCIVNEHVDEGNIKENAVRMMECIVNKDSEKLFDFYNKDMKDNYKDSSLDEIRQLFEYID--GAITSYNYEGKGGGQEAKNDGIICYYSCHPEFDFTTETGQEYTISFSYHYIWNEHPEYEGINMIQICKDGNWGEKLIIGRNYYKE
1DPU Chain:A ((31-99))
------------------------------ANGLTVAQNQVLNLIKACPRPE--GLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKSTDAE-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DPU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11759 for 443 contacts (-26.5/contact) +
2D Compatibility (PS) -7603 + (NN) -5931 + (LL) 6672
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -22371.0 ( -50.50 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_1DPU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DPU-query.scw
PDB file :
Tito_Scwrl_1DPU.pdb
: