Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AARYDDVLYFPASRYPETGAHISDAIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNR------GAGSWVGNRLNGYADGTRILFIVQ-
1JJU Chain:A ((274-351))
AAP--QVLAVAPAR-----------LKIGEETQLRVAGTG--------LGSDLTL----------------PEGVAGSVESAGNGVTVLKLTATGTPGPVSLE--LGGQKVDLVAYD
General information:
TITO was launched using:
RESULT:
Template:
1JJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10577 for 445 contacts (-23.8/contact) +
2D Compatibility (PS) -7603 + (NN) -3513 + (LL) 1372
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -22271.0 ( -50.05 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_1JJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJU-query.scw
PDB file :
Tito_Scwrl_1JJU.pdb
: