Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGE----REKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKL---SDADLISCLYQATTEHR---RLIAQRRGVSEVVADALIEVG------EPAVIETLLR-NELVKL-------SHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSE-ARRVIL---QRFAVSREILQDAVGDVFALASA----------------EGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR------------------------------- |
| 1KNW Chain:A ((2-422)) | -------------------------------------PHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGEN--------SKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEI---------EPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETV-----VAGPLCESGDVFTQ-QEGGNVETRALPEVKAGDYLVLHDTGAYG-ASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELLHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65800 for 2601 contacts (-25.3/contact) +
2D Compatibility (PS) -35894 + (NN) -3192 + (LL) 4240
1D Compatibility (HY) -1200 + (ID) 1750
Total energy: -103596.0 ( -39.83 by residue)
QMean score : 0.100
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