Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELG--LIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGS-AADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTS-----------VAEPNWWT----WRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNF--KQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWE---ISRDAVYLERAVDLSLWFFKNNPAQ-------------------------------AQMYYPVTGIAFDGIDSATT---------------VNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 1TF4 Chain:A ((1-460)) | EPAFNYAEALQKSMFFYEAQRSGKLPE-NNRVSWRGDSGLNDGADVGLDLTGGWYDAGDH--VKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVG-DGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFY-------NSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDF-------LSTEQQTDLRSYRW---TIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYWTV--GVNGQRVPY--SPGGMAVLD----TWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGGTPLADFP-----PTEEPDG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105218 for 3409 contacts (-30.9/contact) +
2D Compatibility (PS) -41344 + (NN) -15806 + (LL) 4048
1D Compatibility (HY) 1600 + (ID) 2800
Total energy: -159520.0 ( -46.79 by residue)
QMean score : 0.312
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