Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVLLLVFLSLTWLSASAQA---LVPITWTAYGLTFEAPKGILVEEDTEETFLLNNSRFYITIQSLDSDGMTKSDLK------------------------------------------SVLKDYANDDGVKDQSAVQEFELPQFFGTYLKGSCETDHCLYACLMTKAAGSGFYISIIYSKENENIAEKILKSFTMEE |
1QU2 Chain:A ((201-394)) | HDKRSASIYVAFNVKDDKGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGMFYDKANKA-VTDLLTEKGALLKLDFITHSY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43476 for 1035 contacts (-42.0/contact) +
2D Compatibility (PS) -15672 + (NN) -329 + (LL) 600
1D Compatibility (HY) 0 + (ID) 1250
Total energy: -60127.0 ( -58.09 by residue)
QMean score : 0.109
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