Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHMVAMQSTIPSLTREEIADRMQHN---PLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVLQKPSEGEDLSRQVAENPTSVHKLAGRNLCGLKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA
2XVC Chain:A ((4-59))
---HHHHHMI---------TERELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLIAVES---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4923 for 306 contacts (-16.1/contact) +
2D Compatibility (PS) -5527 + (NN) 1083 + (LL) 6272
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -4995.0 ( -16.32 by residue)
QMean score : 0.107
(partial model without unconserved sides chains):
PDB file :
Tito_2XVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XVC-query.scw
PDB file :
Tito_Scwrl_2XVC.pdb
: