Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVA---DGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILNEQYGLVTGDGIRRIDLKSLNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDG-NVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVSTDGAIYKYILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN |
| 1RI6 Chain:A ((2-334)) | --SLKQTVYIASPESQ----------QIHVWNLNH-----EGALTLTQVVDVPGQVQPMVV---SPDKRYLYVGVRPEF----RVLAYRIAPD-DGALTFAAESALPGSLTHISTDHQGQ----FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSA-------NISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV--------------EGAGPRHMVFHPNEQ---------YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI----------TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPR------GFNVDHSGKYLIAAGQKS------------------------HHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90043 for 2929 contacts (-30.7/contact) +
2D Compatibility (PS) -36596 + (NN) -14013 + (LL) 7144
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -144908.0 ( -49.47 by residue)
QMean score : 0.209
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