Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATMAFHPMLCRLELSVSAAPPASPIDATLLR--SLITSVLNSSWVDLGG----NTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV
2B59 Chain:B ((8-163))
GYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISRATYLDRVIANVVVTGDTSVSTSQAPIMMWVGDIVKDNSIN-----------LLDVAEVIRCFNATKGSANYVEELDINRNG-----------------------------AINMQDIMIVHKHFGATSSDYDA
General information:
TITO was launched using:
RESULT:
Template:
2B59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41479 for 1075 contacts (-38.6/contact) +
2D Compatibility (PS) -16030 + (NN) -7486 + (LL) 2784
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -67161.0 ( -62.48 by residue)
QMean score : 0.024
(partial model without unconserved sides chains):
PDB file :
Tito_2B59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B59-query.scw
PDB file :
Tito_Scwrl_2B59.pdb
: