Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEEKMTNGQLWKKVKDSLIDSNIISGNEN--EEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID
2HFT Chain:? ((1-106))
------------------------SGTTNTVAAYNLTWKSTN-FKTILE--------WEPKPVN--QVYTVQISTKSGDWK--SKCFYTTDTECDLTDEIVKD--VKQTYLARVFSYPAGNVESTEPLYENSPEFTPYLET-------------
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 34134 for 690 contacts (49.5/contact) +
2D Compatibility (PS) -10866 + (NN) -5346 + (LL) 2228
1D Compatibility (HY) -3200 + (ID) 600
Total energy: 16350.0 ( 23.70 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: