Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGELPGSEGMWENCPLGWVKKKASGTLAPLDFLLQRKRLWLWASEPVRPQPQGIHRFREARRQFCRMRGSRLTGGRKGFGSSGLRFGRGGFSEEVMPQPVLKAMRCAEGAWWFSPDGPAGSAASIWPAEGAEGLPGQLGRDRLEVVYSVPDNVPGQNGSRRPLVCKITGKCLSVCSEENAKAGGCSAFPLLLSQLGARMTGREHAHKGPELTTPDSGLPRPPNPALAGFRALAQHSPPLGTSTPSAVLLSAAT |
1N4N Chain:A ((13-37)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------VCINKKPCVACCKKAKFSDGHCSKILRRCLCTKEC------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5713 for 111 contacts (-51.5/contact) +
2D Compatibility (PS) -2217 + (NN) 2095 + (LL) 8368
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -617.0 ( -5.56 by residue)
QMean score : 0.307
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