Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMHFIFSDTAVLLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDGDSAGSDSFPVGRTHHRWYLCHFGQSL-IHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYLAYPLLSTA
2CI4 Chain:A ((16-64))
-----------------------------------------------------VVRALPESLAQQALRRTKGDEV---DFARAERQHQLYVGVLGSKLGLQVVQLPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEADM
General information:
TITO was launched using:
RESULT:
Template:
2CI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13972 for 225 contacts (-62.1/contact) +
2D Compatibility (PS) -4622 + (NN) 1159 + (LL) 5040
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -17995.0 ( -79.98 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_2CI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CI4-query.scw
PDB file :
Tito_Scwrl_2CI4.pdb
: