Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSCPEDPWTVGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRCFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGA-SISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNIS-SPGCEKVPINTSCNPTAHLVNSSCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFG-ALILTLVQIARVILEYIDHKLRGVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKKRKK |
| 3OC2 Chain:A ((35-545)) | -----------ARSVRHIAIPAHRGLITDRNGE-------------PLAVSTPVTTLWANPKELMTAKERWPQLAAALGQDTKLFADRIE----------------------------QNAEREFIYLVRGLTPEQGEGVIALK----VPGVYSIEEFRRFY----------PAGEVVAHAVGFTDVDDRGREGIELA---------FDEWLAGVPGKRQVLKD-----------------------------------------------------RRGRVIKDVQVTKNAKPGKTLALSIDLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTYNPNNRRNLQPAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYPGTLQIGRYTIRDVSRNSRQLDLTGILI----KSSNVGISKIAFDIGAESIYSVMQQVGL----------GQDTGLGFPGERVGNLPNHRKWP------KAETATLAYGYGLSVTAIQLAHAYAALAND---GKSVPLS-------------------MTRVDRV----------------------PDGVQVISPEVASTVQGMLQQVVEAQGGV------FRAQVPGYHAAGKSGTARKAYRSLFAGFAPA---------------TDPRIAMVVVIDEPFGGLVSAPVFSKVMAGALRLMN-VPPDNL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -328040 for 4476 contacts (-73.3/contact) +
2D Compatibility (PS) -50686 + (NN) -8505 + (LL) 20988
1D Compatibility (HY) 1200 + (ID) 3700
Total energy: -368743.0 ( -82.38 by residue)
QMean score : 0.090
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