Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRAPLKRSRILHMALTGASDPSAEAEANGEK--PFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTT-SFYALLTCGIIIG---GFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFG-------FAIGYVTGLQIKF----TSPLTHN--------------VSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV |
| 2CY7 Chain:A ((5-377)) | ----TLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFT---------YRKNFPAIGGTGP----------------------------------TSDTGWGCMLRCGQMIFAQALVCRHLGRDWR---WTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYG--PNTVAQVLKKLA-VFDTWSSLAVHI-AMDNTVVMEEIRRLCRTSVPCSPWRPLVLLIPLRL---GLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLPMFELV---EQQPDVLNLSLDSSDVERL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214442 for 2332 contacts (-92.0/contact) +
2D Compatibility (PS) -31195 + (NN) 979 + (LL) 4456
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -255152.0 ( -109.41 by residue)
QMean score : 0.245
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