Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSYGERLGSPAVSPLPVRGGHVMRGTAFAYVPSPQVLHRIPGTSAYAFPSLGPVALAEHTCPCGEVLERHEPLPAKLALEEEQKPESRLVPKLRQAGAMLLKVPLMLTFL-----YLFVCSLDMLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIIVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATGYLHHITRLVVASFNIHGGRDAPDLLKIITEPFTKLIIQLDESVITSIATGDESLRNHSLIQIWCHPDSLQAPTSMSRAEANSSQTLGNATMEKCNHIFVDTGLPDLAVGLILLAGSLVLLCTCLILLVKMLNSLLKGQVAKVIQKVINTDFPAPFTWVTGYFAMVVGASMTFVVQSSSVFTSAITPLIGLGVISIERAYPLTLGSNIGTTTTAILAALASPREKLSSAFQIALCHFFFNISGILLWYPVPCTRLPIRMAKALGKRTAKYRWFAVLYLLVCFLLLPSLVFGISMAGWQVMVGVGTPFGALLAFVVLINVLQSRSPGHLPKWLQTWDFLPRWMHSLKPLDHLITRATLCCARPEPRSPPLPPRVFLEELPPATPSPRLALPAHHNATRL-- |
| 4B28 Chain:A ((32-468)) | -----RKIDPSRGATLGDGSPNDMNRVE-------------IGPTQLAFAEWHTARL---------------DLPDLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNSPFLSEFNP------LVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAV-------------------------DKVMLHGLRALQA-QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDG-----VTCENDIWAILHSENVRRGGEWIE-----TRLLASGPRSNPWFQECGPR------VCQRNEIISFDTDLV----------------------------------GAYGICTDISRSWWIGD------------------------------------------QKPRADMIYAMQHGVEHIRTNME---MLKPGVMIPELSANTHVLDAKFQKQKYGCLMHGVGLCDEWPLVAYPDHAVAG----AYDYPLEPGMTLCVEALISEEGGD---------------------------------------------FSIKLEDQVLITEDGYENLTKYPFDPALMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -339968 for 3733 contacts (-91.1/contact) +
2D Compatibility (PS) -44953 + (NN) 4976 + (LL) 15044
1D Compatibility (HY) -1600 + (ID) 3000
Total energy: -369501.0 ( -98.98 by residue)
QMean score : 0.098
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