Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSSLPGSQVPHPTLDAVDLVEKTLRNEGTSSSAPVLEEGDTDPWTLPQLKDTSQPWKELRVAGRLRRVAGSVLKACGLLGSLYFFICSLDVLSSAFQLLGSKVAGDIFKDNVVLSNPVAGLVIGVLVTALVQSSSTSSSIVVSMVAAKLLTVRVSVPIIMGVNVGTSITSTLVSMAQSGDRDEFQRAFSGSAVHGIFNWLTVLVLLPLESATALLERLSELALGAASLTPRAQAPDILKVLTKPLTHLIVQLDSDMIMSSATGNATNSSLIKHWCGTTGQPTQENSSCGAFGPCTEKNSTAPADRLPCRHLFAGTELTDLAVGC---ILLAGSLLVLCGCLVLIVKLLNSVLRGRVAQVVRTVINADFPFPLGWLGGYLAVLAGAGLTFALQSSSVFTAAVVPLMGVGVISLDRAYPLLLGSNIGTTTTALLAALASPADRMLSALQVALIHFFFNLAGILLWYLVPALRLPIPLARHFGVVTARYRWVAGVYLLLGFLL---LPLAAFGLSLAGGMELAAVGGPLVGLVLLVILVTVLQRRRPAWLPVRLRSWAWLPVWLHSLEPWDRLVTRCCPCNVCSPPKATTKEAYCYENPEILASQQL |
| 4B28 Chain:A ((32-468)) | ---------------RKIDPSRGATLGDGSPNDMNRVEIGPTQLAFAEWHTARLDLPDLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNM-----------QLWNTHNPFRATLLCADGYMVMWDYKNSPFLSEFN---PLVREQRAGADLFYFDRGDKVDVAADVFAN--EVRILLRDHAPGLRRLAVDKVMLHGLRALQA-QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTC-----------------END---IWAILHSENVRRGGEWIETRLLASGPRSNPWFQECGPRVCQRNEIISFDTDLV------------------------------GAYG---------------------------------ICTDISRSWWIGDQ-------------KPRADMIYAMQHGVEHIRTNME-----MLKPGVMIP-ELSANTHVLDAKFQKQKYGCLMHGVGLCDEWPLVAYPDHAVAG----AYDYPLEPGMTLCVEALISEEGGDF--SIKLEDQVLIT------EDGYENLTK-------------------YPFDPALMG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320828 for 3764 contacts (-85.2/contact) +
2D Compatibility (PS) -44927 + (NN) 4272 + (LL) 11692
1D Compatibility (HY) -2000 + (ID) 3250
Total energy: -355041.0 ( -94.33 by residue)
QMean score : 0.192
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