Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFTDLLDALGSMGRFQLNHTALLLLPCGLLACHNFLQNFTAAVPPHHCRGPANHTEASTNDSGAWLRATIPLDQLGAPEPCRRFTKPQWALLSPNSSIPGAATEGCKDGWVYNRSVFPSTIVMEWDLVCEARTLRDLAQSVYMAGVLVGAAVFGSLADRLGCKGPLVWSYLQLAASGAATAYFSSFSAYCVFRFLMGMTFSGIILNSVSLVVEWMPTRGRTVAGILLGYSFTLGQLILAGVAYLIRPWRCLQFAISAPFLIFFLYSWWLPESSRWLLLHGKSQLAVQNLQKVAAMNGRKEEGERLTKEVMSSYIQSEFASVCTSNSILDLFRTPAIRKVTCCLMVIWFSNSVAYYGLAMDLQKFGLSLYLVQALFGIINTPAMLVATATMIYVG-RRATVASFLILAGLMVIANMFVPEGTQILCTAQAALGKGCLASSFICVYLFTGELYPTEI----RQMGMGFASVHARLGGLTAPLVTTLGEYSTILP--PVSFGATAILAGLAVCVLTETRNMPLVETI-----------AAMERRVKEGSSKKHVEEKSEE------ISLQQLRASPLKETI---- |
3WDO Chain:A ((1-453)) | -----------------------------------------------------DYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGAS-----------------------------------EALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGS--GAIAAAVMALLSDLTREQNRTKAMAFIGVSFG----ITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHV--------------------LNRE--SGMVKGSFSKVLAE---------PRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQ--FWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLG---VAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEGVKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298242 for 3626 contacts (-82.3/contact) +
2D Compatibility (PS) -43669 + (NN) -4045 + (LL) 8864
1D Compatibility (HY) -23200 + (ID) 4300
Total energy: -364592.0 ( -100.55 by residue)
QMean score : 0.248
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