Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------MFANLKYVSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACIL----------LVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVT----YQLKILTTALFSVSMLSKKLGVYQWL---------SLVILMTGVAFVQWPSDSQLDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYIYD---GELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAV-IKYADNILKGFATSLS---------IILSTLISYFWLQDFVPTSVF------------FLGAILVITATFLYGYDPKPAGNPTKA- |
| 3BG1 Chain:B ((130-552)) | DEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIVGKSGVSIKRLPTELQRKFLFDDVYLDKEIEKVTIEARKSNPYPQISESSLLFKDALDYMEKTS--SDYNLWKLSSILFDPVSYPYKTDNDQVKMALLKKERHCRLTSWIVSQIGPEIEEKIRNSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIRDLAELQLQKWSTGGCSIDKNISKIYKLLSGSPFEGLFSLKELESEFSWLCLLNLTLCYGQIDEYS--LESLVQSHLDK-----FSLPYDDPIGVIFQLYAANENTEKLYKEVRQRTNALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRASTNDHILNRLKIPSQLIFNAQALKDRYEGNYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212652 for 2298 contacts (-92.5/contact) +
2D Compatibility (PS) -32440 + (NN) -7434 + (LL) 1192
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: -258534.0 ( -112.50 by residue)
QMean score : 0.243
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