Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MAEVHRRQHARVKGEAPAKSSTLRDEEEL-GMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYR------FPSSLCVGLGQMVAT-----VAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQ----------------ITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFA-------MIIGAFVAASSDLAFDLEGYAFI---LINDVLTAANGAYVKQK-----LDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMG--FILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNI--SIAGSL--VYSYITFT-----EEQLSKQSEANNKLDIKGKGAV---- |
| 4D10 Chain:B ((34-447)) | VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKN---DPEILAMTNLVSAYQNND---ITEFEKILKT------NHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179960 for 2294 contacts (-78.4/contact) +
2D Compatibility (PS) -35408 + (NN) -6294 + (LL) 1600
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -236012.0 ( -102.88 by residue)
QMean score : 0.251
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