Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDELLLDLFHKLTSGRQLAAGNGLCGISHKEQEVWKPGHNILVKMRKEDKSLVWLIHSTLARYTQVTNFLGTSRSSVTRCKPGANCPSSHSGISRQLSPLSVTEDSSAPILELQNQGSSGVCGHRVERQNRSADDGTQTHSENSSQENRIKARCLSCTSMVLKGIWGLLIILSVSSSWVGTTQIVKITYKNFYCPFFMTWFSTNWNIMFFPVYYSGHLATAQEKQSPMKKFRECSRIFGEDGLTLKLFLKRTAPFSILWTLTNYLYLLALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGIVMMAYADNFHADSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWSSFAALPWGCLCGMAGLWLAFNILV-------NVGVVLTYPI-LISI-GTVLSVPGNAAVDLLKQEVIFNVVRLAATIIICIGFLL--------MLLPEEW---DEIT-LRFINSLKEKKSEEHVDDVTDPSIHLRGRGRANGTVSIPLA |
| 2Q82 Chain:A ((14-128)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELQNRLAQYETSLMVMSHNGDVPVITGFNVMRVTTMLDALKVPAVAVLGDDAQDLAYVFGARPLAVGVNIIRVVDVPGQQPSALVDAELGALHEVSMVRVLNDIADEQLVKANM------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53534 for 469 contacts (-114.1/contact) +
2D Compatibility (PS) -8969 + (NN) -60 + (LL) 30040
1D Compatibility (HY) 1600 + (ID) 300
Total energy: -31223.0 ( -66.57 by residue)
QMean score : 0.119
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