Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALLGGGLPAGFVGPLSRMAYQASNLPSLELVICRCLFHLPIALLLKLRGDPLLGPPDIRGRTCFCALLNVLNIGCAYSAVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIIIVGPGLWTLQEGTTGVYTGLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQSPVLPSDLLSWSCVGAVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVMALI--LQYFMLHETVAPSDIMGAGVVLGSIAIITARNLICERTGKVEE---
1NYH Chain:A ((1271-1346))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGD-LTFTKKCLENARSQISEKDAKINKLME


General information:
TITO was launched using:
RESULT:

Template: 1NYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10320 for 275 contacts (-37.5/contact) +
2D Compatibility (PS) -7391 + (NN) -2294 + (LL) 14208
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -8497.0 ( -30.90 by residue)
QMean score : -0.206

(partial model without unconserved sides chains):
PDB file : Tito_1NYH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NYH-query.scw
PDB file : Tito_Scwrl_1NYH.pdb: