Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI |
| 4OLT Chain:A ((69-123)) | -----------------------------------------------------------------------------------------------------------------------------MLELVRAYSASSPGNPLEQYIPALEAVNGTDSHAGLGQGFEQAWADAAETSEFRAAQDAERDRVYFDPAVAQGKADGLSALGQFAYYDTLVVHGPGSQRDAFGGIRAEALSAALPPSQGGDETEYLEAFFDARNVIMREEPAHADTSRIDTAQRVFLQNGNFDLERPLTWSVYGDQYSLN------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 10203 for 333 contacts (30.6/contact) +
2D Compatibility (PS) -5951 + (NN) -3011 + (LL) 12448
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 10689.0 ( 32.10 by residue)
QMean score : 0.292
|
|
|