Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAKEKQHLLDARPAIRSYTGSLWQEGAGWIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSV-LSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSVEGVEALHSLHIWAL-----TVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQI-EDYSEDMKDCQACQGPSD |
| 2FV2 Chain:A ((2-268)) | ------------REKIYQWINEL---------SSPETRENALLELSKKRESV---------------PDLAPMLWH-SFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPET--RSAFLAAHIPLFLYPFLH-------------TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTE--------IIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQC---LPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228472 for 2115 contacts (-108.0/contact) +
2D Compatibility (PS) -27221 + (NN) -8250 + (LL) 1952
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -271741.0 ( -128.48 by residue)
QMean score : 0.322
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