Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPGRTQIKLDPRYTADLLEVLKTNYGIPSACFSQPPTAAQLLRALGPVELALTSILTLLALGSIAIFLEDAVYLYKNTLCPIKRRTLLWKSSAPTVVSVLC-----CFGLWIPR-SLVLVEMTITSFYAVCFYLLMLVMVEGFGGKEAVLRTLRDTPMMVHTGPCCCCCPCCPRLLLTRKKLQLLM---LGPFQYAFLKITLTLVGLFLVPDGIYDPADISEGSTALWINTFLGVSTLLAL-----WTLGIISRQARLHLGEQNMGAKFALFQVLLILTALQPSIFSVLANGGQ----IACSPP----YSSKTRSQVMNCHLL-------ILETF---------LMTVLTRMYYRRKDHKVGYETFSSPDLDLNLKA------------- |
| 2B78 Chain:A ((1-385)) | MIKLMVGSFAEKKLKRGVQLLSSRDYPNLNLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPKKVSL-NVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKIRFNVSAHLYGQ-----EAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNELIN---------GSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNVQDESSNYLKVFTIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242895 for 2516 contacts (-96.5/contact) +
2D Compatibility (PS) -33323 + (NN) -481 + (LL) 412
1D Compatibility (HY) 1600 + (ID) 1900
Total energy: -276587.0 ( -109.93 by residue)
QMean score : 0.237
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