Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDLITEPFLPKLLTKVKGS
1PJM Chain:A ((1-20))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGKRSAEGSNPPKPLKKLRG------------------


General information:
TITO was launched using:
RESULT:

Template: 1PJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1132 for 47 contacts (24.1/contact) +
2D Compatibility (PS) -2337 + (NN) -7409 + (LL) 28476
1D Compatibility (HY) -400 + (ID) 350
Total energy: 19112.0 ( 406.64 by residue)
QMean score : 0.791

(partial model without unconserved sides chains):
PDB file : Tito_1PJM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PJM-query.scw
PDB file : Tito_Scwrl_1PJM.pdb: