Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKKRALSLLLALCLCLSLMPAASASVVESTV---------QVGPYTFEIWFDGTATLTRYDESLA--GSTYADIPASVTD-ENGQEYPVTVIGEKAFEETNI------TGVTVPDSVISI--------------GRLAFAYCNSLSDVKLSENLIYIN-----------------ELAFASCDALKE-----------ITIPASVEKMDNP---FRWSNALDTVYMEGMVAPE |
| 4F0D Chain:A ((2-271)) | MGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDKYFVVTNNQLLRVKYLLVYSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65380 for 1152 contacts (-56.8/contact) +
2D Compatibility (PS) -18350 + (NN) -3308 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -94088.0 ( -81.67 by residue)
QMean score : 0.187
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