Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNI-SQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 1UYJ Chain:A ((80-177)) | ----------------------------------------------------------------LEDVYVGKALLTNDT--QQEQKL---KSQSFTCKNTDTVTATTTHTVGTSIQATAKFTVPF-------NETGVSLTTSYSFANTNTNTNSKEITHNVPSQDILVPANTTV---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17187 for 509 contacts (33.8/contact) +
2D Compatibility (PS) -10615 + (NN) -7355 + (LL) 9788
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: 2455.0 ( 4.82 by residue)
QMean score : 0.058
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