Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEAR--KLTPPQISTLMRISD-KLAGIN--------AARFHDWQPDFTPANA------------RQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRML--SGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDI-ITNKLNEALAAQGDNVVINLASDEYFKSVKPK--------------KLNAEIIKP--VFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLT-------GFNSEGYF-------------FDEDSSSNGELVFKRYEQR |
| 1JSD Chain:A ((1-317)) | --DKICIGYQSTNSTETVDTLTETNVPVTHAKELLHTSHNGMLCATNLGHPLILDTCTIEGLIYGNPSCDLLLGGREWSYIVERPSAVNGMCYPGNVENLEELRSLFSSASSYQRIQIFPDTIWNVSYSGTSSACSDSFYRSMRWLTQKNNAYPIQDAQYTNNRGKSILFMWGINHPPTDTVQTNLYTRTDTTTSVTTEDINRTFKPVIGPRPLVNGLHGRIDYYWSVLKPGQTLRVRSNGNL-IAPWYGHILSGESHGRILKTDLNSGNCVVQCQTERGGLNTTLPFHNVSKYAFGNCPKYVGVKSLKLAVGLRNVPAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14501 for 1708 contacts (-8.5/contact) +
2D Compatibility (PS) -25589 + (NN) 8245 + (LL) 448
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -35897.0 ( -21.02 by residue)
QMean score : 0.038
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