Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFV-GPEALERQHGRKIAARIGANESGFGPAPSVLLAIRQAAGD--TWKYADPENHDLKQALARHLG------TSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYHVAGHGGRLVTVPYAD--DREDLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPETT-LLVLDEAYCETAPRDA-LPPIESLID--KPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNH--FGMSRIGVAAAIAALA-DQDYLKEVTLKIANSRQRIGRIAAD-SGLAPL-PSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAPLNRCIRISTAPDAEMDLLAAALPEVIRSLAAT- |
| 1J32 Chain:A ((1-388)) | M----KLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATD--LDTIKRGMERLEKFLHGIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195738 for 3197 contacts (-61.2/contact) +
2D Compatibility (PS) -40587 + (NN) -28915 + (LL) 468
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -281622.0 ( -88.09 by residue)
QMean score : 0.512
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