Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSF---QIDGDAPELLKGAGEAFAS--VERHLLFLTWRLRGDAKQLGP-HTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVA--SRGDIDPGLLANDLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIG------------EDFWPQALREVADKAPPKPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP-------------- |
| 1VP5 Chain:A ((14-297)) | QVPKVTL-NNGVEMPILGYGVF---QIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLW--VSDVGYESTKKAFEKSLKK-LQLEYIDLYLIHQPFGD--VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMD-LMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKNIFQN---GVLRSIAEKY---------------------------GKTVAQVILRWLTQKGIV--AIPKTVRRERMKENISIFDFELT-----QEDMEKIATLDEGQSAFFSHRDPEVVKWICSLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110363 for 2035 contacts (-54.2/contact) +
2D Compatibility (PS) -26918 + (NN) -7615 + (LL) 244
1D Compatibility (HY) -15200 + (ID) 2150
Total energy: -162002.0 ( -79.61 by residue)
QMean score : 0.384
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