Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVS--YQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSCGTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKVPNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
3OYZ Chain:A ((5-432)) | RHDREFVRTFFTSPT-----AVEGEDDSAKMLRRAAGLRGMQA--PDVWVPDNE-----------DATAPSMRDEGAENIVEVISEQGAEFPGEIHPRMVWHRD--SPETRYQGFQHMLDITD-------------PERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGL--------DEGSLAMSVIIES---------------GEAELAMGDLRDEMGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSR---GASAAGCVAVDGPYDDIR--DVEGYRERMTDNQA----------------------KGMLGIWS------------------LTPGQVVEANTSPLPPKTGS--------WLLDADELREELLGLT-----------------------SYVPSMDDIVDSMEEFEAAKEAGRGAIAMTQSATIEKDRMWDEATYQAA----------MTPISLFQDVYEN---------RPDQHEELEERYGAGVVERAMEVG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177701 for 3142 contacts (-56.6/contact) +
2D Compatibility (PS) -39159 + (NN) -5931 + (LL) 11040
1D Compatibility (HY) 10000 + (ID) 2050
Total energy: -203801.0 ( -64.86 by residue)
QMean score : 0.195
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