Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARAL-----LVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVG-------EPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPF-NSLDEAVAAGEGGFNREIAEEISYL---------SGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR------------- |
| 1AQ0 Chain:A ((1-306)) | ------------------------------------------------------------------------------------------------IGVCYGMSANNLPAASTVVSMFKSNGIKSMRL----YAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAA--AASWVKSNIQAYPKVS-FRYVCVGNEVAGGATRN--LVPAMKNVHGALVA-AGLGHIKVTTSVSQAILGVFSPPSAGSFT---GEAAAFMGPVVQFLARTNAPLMANIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTV----DAFYTAMGKHGGSS--VKLVVSESGWPSGGGTAATPANARFYNQHLINHV----------------GRGTPRHPGAIETYIFAMFNENQKDS-----GVEQNWGLFYPNMQHVYPINF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38510 for 2169 contacts (-17.8/contact) +
2D Compatibility (PS) -27341 + (NN) 1250 + (LL) 11452
1D Compatibility (HY) 800 + (ID) 1250
Total energy: -53599.0 ( -24.71 by residue)
QMean score : 0.100
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