Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | DSLPERIDLFVSLFDYNSATTSYDIRSIQTDFPTRLLTPDSMLPQTSEYPLKDIQLLYKLAQSCTGKLPLSPLITEPLVFTRSLCKGSSLSPRWFARSGLIHPGGGTYAFRYAEKYP-------------AQFANLLPYMHIQERPNAAEGTLLYHLQNMGEDAINALVSGASMFGSGSDLWLRKGDIYYLFNEETWLTNANKAGLSYSLLSADNTCFIQRGNICWDVEDHS |
1IWP Chain:B ((136-176)) | ---------------------------------------------------------------------------------------------------------GKNAARYARKESPSPVPVVNDQMVRPKFMAKAALFHIKETK-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2875 for 94 contacts (-30.6/contact) +
2D Compatibility (PS) -3017 + (NN) -1482 + (LL) 10168
1D Compatibility (HY) 0 + (ID) 500
Total energy: 2294.0 ( 24.40 by residue)
QMean score : -0.025
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